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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905437, a HoloFood histological chicken sample
Metadata for sample SAMEA112905437, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 3 | per 100um |
| Acidic goblet cell number | 11.84 | None |
| CD3VillusBase | 22.72 | per 1000um squared |
| CD3VillusBaseEP | 16.46 | per 1000um squared |
| CD3VillusBaseLP | 40.25 | per 1000um squared |
| CD3VillusTip | 20.85 | per 1000um squared |
| CD3VillusTipEP | 16.42 | per 1000um squared |
| CD3VillusTipLP | 39.52 | per 1000um squared |
| CD3crypt | 16 | per 1000um squared |
| CD3cryptEP | 22.47 | per 1000um squared |
| CD3cryptLP | 9.53 | per 1000um squared |
| Crypt depth | 94.7 | um |
| Epithelial area | 47.25 | per 1000um squared |
| Mixed goblet cell density | 21.6 | per 100um |
| Mixed goblet cell number | 85.26 | None |
| Total goblet cell density | 24.6 | per 100um |
| Total goblet cell number | 97.1 | None |
| Villus height | 394.7 | um |
| Villus height: crypt depth ratio | 4.17 | um/um |
| Villus width | 119.7 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA05.03A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CE | None |
| Treatment name | Prebiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905437
