MGYG000307538

Taxonomy

UBA2112 Bacteria > Patescibacteria > Saccharimonadia > Saccharimonadales > UBA2112 > UBA2112

Cluster representative

MGYG000307538

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000307538 on MGnify
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Annotations

MGYG000307538’s cluster representative genome MGYG000307538 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000307538 from each CAZy category.

API endpoint

/api/genome-catalogues/salmon-gut-v2-0/genomes/MGYG000307538 Copy API Endpoint

MGYG000307538’s cluster representative (MGYG000307538) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000307538’s sequence. Because MGYG000307538 has been clustered with MGYG000307538 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000307538.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000307538

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Containment	Sample accession	Animal accession	Treatment
0.62	SAMEA7688142	SAMEA112949495	Sanford Blue Mussel Meal
0.34	SAMEA7688136	SAMEA112948814	Sanford Blue Mussel Meal
0.25	SAMEA7688193	SAMEA112949684	Sanford Blue Mussel Meal