MGYG000307503

Taxonomy

Aeromonas sobria Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacterales > Aeromonadaceae > Aeromonas > Aeromonas sobria

Cluster representative

MGYG000299622

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000299622 on MGnify
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Annotations

MGYG000307503’s cluster representative genome MGYG000299622 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000299622 from each CAZy category.

API endpoint

/api/genome-catalogues/salmon-gut-v2-0/genomes/MGYG000307503 Copy API Endpoint

MGYG000307503’s cluster representative (MGYG000299622) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000299622’s sequence. Because MGYG000307503 has been clustered with MGYG000299622 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000307503.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000299622

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Containment	Sample accession	Animal accession	Treatment
0.41	SAMEA13604657	SAMEA112949478	Ensilaged blue mussel protein
0.36	SAMEA13604620	SAMEA112949913	Ensilaged blue mussel protein
0.27	SAMEA13604560	SAMEA112948626	Ensilaged blue mussel protein