HoloFood Data Portal

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MGYG000320866

Details for MGYG000320866, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Onthousia Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Onthousia
Cluster representative

MGYG000318577

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318577 on MGnify
 Show other genomes in cluster
Annotations

MGYG000320866’s cluster representative genome MGYG000318577 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318577 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320866 Copy API Endpoint
Samples containing this genome

MGYG000320866’s cluster representative (MGYG000318577) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318577’s sequence. Because MGYG000320866 has been clustered with MGYG000318577 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320866.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318577

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Containment Sample accession Animal accession Treatment
0.25 SAMEA9449854 Prebiotic
0.25 SAMEA7025248 Probiotic
0.25 SAMEA10104997 Prebiotic
0.24 SAMEA10104984 Control
0.24 SAMEA7025245 Probiotic
0.24 SAMEA9449878 Control
0.23 SAMEA10105039 Probiotic
0.21 SAMEA7025236 Probiotic
0.21 SAMEA7722478 Control
0.20 SAMEA7722473 Prebiotic