MGYG000320857

Taxonomy

Faecenecus gallistercoris Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Faecenecus > Faecenecus gallistercoris

Cluster representative

MGYG000315127

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315127 on MGnify
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Annotations

MGYG000320857’s cluster representative genome MGYG000315127 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315127 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320857 Copy API Endpoint

MGYG000320857’s cluster representative (MGYG000315127) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315127’s sequence. Because MGYG000320857 has been clustered with MGYG000315127 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320857.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315127

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571807	SAMEA112905097	Probiotic
1.00	SAMEA10455473	SAMEA112904945	Probiotic
0.99	SAMEA10104918	SAMEA112904806	Probiotic
0.99	SAMEA10104923	SAMEA112904972	Control
0.99	SAMEA9449895	SAMEA112905248	Probiotic
0.99	SAMEA9449830	SAMEA112904739	Control
0.98	SAMEA10104908	SAMEA112905066	Control
0.98	SAMEA10104938	SAMEA112904831	Prebiotic
0.98	SAMEA9449875	SAMEA112905114	Prebiotic
0.98	SAMEA9449885	SAMEA112905121	Control