MGYG000320823

Taxonomy

Agathobaculum intestinigallinarum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Butyricicoccaceae > Agathobaculum > Agathobaculum intestinigallinarum

Cluster representative

MGYG000310077

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310077 on MGnify
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Annotations

MGYG000320823’s cluster representative genome MGYG000310077 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310077 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320823 Copy API Endpoint

MGYG000320823’s cluster representative (MGYG000310077) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310077’s sequence. Because MGYG000320823 has been clustered with MGYG000310077 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320823.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310077

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA9449830	SAMEA112904739	Control
0.21	SAMEA7571817	SAMEA112905294	Control
0.20	SAMEA10104927	SAMEA112904910	Prebiotic
0.20	SAMEA14095992	SAMEA112904848	Probiotic
0.20	SAMEA9449878	SAMEA112904817	Control