MGYG000320811

Taxonomy

Scatosoma pullistercoris Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Scatosoma > Scatosoma pullistercoris

Cluster representative

MGYG000314953

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000314953 on MGnify
 Show other genomes in cluster

Annotations

MGYG000320811’s cluster representative genome MGYG000314953 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000314953 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320811 Copy API Endpoint

MGYG000320811’s cluster representative (MGYG000314953) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000314953’s sequence. Because MGYG000320811 has been clustered with MGYG000314953 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320811.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000314953

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571801	SAMEA112904766	Probiotic
1.00	SAMEA7722473	SAMEA112905065	Prebiotic
1.00	SAMEA10104911	SAMEA112904777	Probiotic
1.00	SAMEA7025269	SAMEA112904942	Probiotic
1.00	SAMEA10104941	SAMEA112904809	Probiotic
1.00	SAMEA7025289	SAMEA112905253	Control
1.00	SAMEA10105016	SAMEA112904744	Probiotic
1.00	SAMEA7571819	SAMEA112905213	Probiotic
1.00	SAMEA10159198	SAMEA112905065	Prebiotic
0.99	SAMEA7571832	SAMEA112905299	Control