MGYG000320761

Taxonomy

Limisoma sp900544305 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Muribaculaceae > Limisoma > Limisoma sp900544305

Cluster representative

MGYG000313199

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313199 on MGnify
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Annotations

MGYG000320761’s cluster representative genome MGYG000313199 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313199 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320761 Copy API Endpoint

MGYG000320761’s cluster representative (MGYG000313199) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313199’s sequence. Because MGYG000320761 has been clustered with MGYG000313199 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320761.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313199

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Containment	Sample accession	Animal accession	Treatment
0.29	SAMEA7571832	SAMEA112905299	Control
0.29	SAMEA7571825	SAMEA112905119	Probiotic