MGYG000320750

Taxonomy

CAG-269 Bacteria > Firmicutes_A > Clostridia > TANB77 > CAG-508 > CAG-269

Cluster representative

MGYG000311519

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311519 on MGnify
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Annotations

MGYG000320750’s cluster representative genome MGYG000311519 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311519 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320750 Copy API Endpoint

MGYG000320750’s cluster representative (MGYG000311519) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311519’s sequence. Because MGYG000320750 has been clustered with MGYG000311519 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320750.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311519

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA9449955	SAMEA112905266	Probiotic
0.21	SAMEA9449940	SAMEA112905148	Prebiotic
0.21	SAMEA10104955	SAMEA112904953	Control
0.21	SAMEA10105025	SAMEA112904944	Prebiotic
0.21	SAMEA10159265	SAMEA112904949	Probiotic
0.20	SAMEA10105030	SAMEA112905361	Prebiotic
0.20	SAMEA10104957	SAMEA112904999	Control
0.20	SAMEA10104950	SAMEA112904815	Prebiotic
0.20	SAMEA7697591	SAMEA112904734	Probiotic
0.20	SAMEA7571779	SAMEA112905087	Prebiotic