MGYG000320216

Taxonomy

Metalachnospira sp902406135 Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Anaerotignaceae > Metalachnospira > Metalachnospira sp902406135

Cluster representative

MGYG000318192

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318192 on MGnify
 Show other genomes in cluster

Annotations

MGYG000320216’s cluster representative genome MGYG000318192 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318192 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320216 Copy API Endpoint

MGYG000320216’s cluster representative (MGYG000318192) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318192’s sequence. Because MGYG000320216 has been clustered with MGYG000318192 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320216.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318192

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10105037	SAMEA112904745	Probiotic
1.00	SAMEA9449907	SAMEA112905341	Prebiotic
1.00	SAMEA7025258	SAMEA112905159	Probiotic
1.00	SAMEA7697626	SAMEA112905069	Probiotic
1.00	SAMEA10159250	SAMEA112905359	Probiotic
1.00	SAMEA9449857	SAMEA112905192	Prebiotic
0.99	SAMEA9449956	SAMEA112904759	Probiotic
0.99	SAMEA7697624	SAMEA112905336	Probiotic
0.99	SAMEA9449963	SAMEA112905164	Probiotic
0.98	SAMEA7571820	SAMEA112905089	Probiotic