HoloFood Data Portal

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MGYG000319947

Details for MGYG000319947, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia_A excrementipullorum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia_A > Blautia_A excrementipullorum
Cluster representative

MGYG000319947

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319947 on MGnify
 Show other genomes in cluster
Annotations

MGYG000319947’s cluster representative genome MGYG000319947 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319947 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319947 Copy API Endpoint
Samples containing this genome

MGYG000319947’s cluster representative (MGYG000319947) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319947’s sequence. Because MGYG000319947 has been clustered with MGYG000319947 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319947.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319947

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Containment Sample accession Animal accession Treatment
0.52 SAMEA7571800 Probiotic
0.48 SAMEA10105051 Control
0.47 SAMEA7025264 Probiotic
0.46 SAMEA10105000 Control
0.46 SAMEA7697598 Control
0.46 SAMEA7571844 Control
0.44 SAMEA7025236 Probiotic
0.39 SAMEA10159244 Probiotic
0.39 SAMEA9449864 Control
0.36 SAMEA10105029 Probiotic