MGYG000319413

Taxonomy

Anaerotignum lactatifermentans Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Anaerotignaceae > Anaerotignum > Anaerotignum lactatifermentans

Cluster representative

MGYG000312529

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312529 on MGnify
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Annotations

MGYG000319413’s cluster representative genome MGYG000312529 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312529 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319413 Copy API Endpoint

MGYG000319413’s cluster representative (MGYG000312529) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312529’s sequence. Because MGYG000319413 has been clustered with MGYG000312529 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319413.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312529

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Containment	Sample accession	Animal accession	Treatment
0.23	SAMEA7025248	SAMEA112905319	Probiotic
0.23	SAMEA10105041	SAMEA112905046	Probiotic
0.22	SAMEA7571829	SAMEA112905154	Prebiotic
0.22	SAMEA9449917	SAMEA112904872	Probiotic
0.21	SAMEA10455485	SAMEA112904918	Control
0.21	SAMEA10105029	SAMEA112904769	Probiotic
0.21	SAMEA10105014	SAMEA112905212	Probiotic
0.20	SAMEA9449949	SAMEA112904930	Prebiotic
0.20	SAMEA9449900	SAMEA112905293	Control