MGYG000316941

Taxonomy

Mediterraneibacter Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Mediterraneibacter

Cluster representative

MGYG000316941

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316941 on MGnify
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Annotations

MGYG000316941’s cluster representative genome MGYG000316941 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316941 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000316941 Copy API Endpoint

MGYG000316941’s cluster representative (MGYG000316941) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316941’s sequence. Because MGYG000316941 has been clustered with MGYG000316941 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000316941.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316941

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Containment	Sample accession	Animal accession	Treatment
0.20	SAMEA7697577	SAMEA112905202	Prebiotic
0.20	SAMEA7697601	SAMEA112905311	Prebiotic