MGYG000315544

Taxonomy

Gallacutalibacter pullicola Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Gallacutalibacter > Gallacutalibacter pullicola

Cluster representative

MGYG000317645

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317645 on MGnify
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Annotations

MGYG000315544’s cluster representative genome MGYG000317645 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317645 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000315544 Copy API Endpoint

MGYG000315544’s cluster representative (MGYG000317645) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317645’s sequence. Because MGYG000315544 has been clustered with MGYG000317645 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000315544.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317645

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA10104978	SAMEA112905303	Control
0.21	SAMEA10105024	SAMEA112905120	Control
0.21	SAMEA9449923	SAMEA112904816	Probiotic
0.20	SAMEA9449955	SAMEA112905266	Probiotic
0.20	SAMEA7571858	SAMEA112904840	Probiotic
0.20	SAMEA10105013	SAMEA112905048	Control
0.20	SAMEA7697626	SAMEA112905069	Probiotic
0.20	SAMEA7697608	SAMEA112905081	Control