MGYG000313509

Taxonomy

Gallimonas sp017887095 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Gallimonas > Gallimonas sp017887095

Cluster representative

MGYG000315687

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315687 on MGnify
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Annotations

MGYG000313509’s cluster representative genome MGYG000315687 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315687 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313509 Copy API Endpoint

MGYG000313509’s cluster representative (MGYG000315687) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315687’s sequence. Because MGYG000313509 has been clustered with MGYG000315687 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313509.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315687

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Containment	Sample accession	Animal accession	Treatment
0.20	SAMEA7571775	SAMEA112904797	Control
0.20	SAMEA9449946	SAMEA112905020	Prebiotic
0.20	SAMEA7025248	SAMEA112905319	Probiotic