MGYG000312925

Taxonomy

Eisenbergiella merdavium Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Eisenbergiella > Eisenbergiella merdavium

Cluster representative

MGYG000316151

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316151 on MGnify
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Annotations

MGYG000312925’s cluster representative genome MGYG000316151 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316151 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000312925 Copy API Endpoint

MGYG000312925’s cluster representative (MGYG000316151) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316151’s sequence. Because MGYG000312925 has been clustered with MGYG000316151 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000312925.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316151

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025242	SAMEA112905292	Control
1.00	SAMEA9449924	SAMEA112905171	Prebiotic
1.00	SAMEA10105057	SAMEA112905285	Control
1.00	SAMEA9449833	SAMEA112904807	Probiotic
1.00	SAMEA7697598	SAMEA112905174	Control
1.00	SAMEA7571841	SAMEA112904773	Probiotic
1.00	SAMEA7025272	SAMEA112905356	Prebiotic
1.00	SAMEA10104954	SAMEA112905000	Control
1.00	SAMEA10158036	SAMEA112904843	Probiotic
1.00	SAMEA14099425	SAMEA112905180	Prebiotic