MGYG000309887

Taxonomy

Onthocola_B stercoravium Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Onthocola_B > Onthocola_B stercoravium

Cluster representative

MGYG000314149

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000314149 on MGnify
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Annotations

MGYG000309887’s cluster representative genome MGYG000314149 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000314149 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309887 Copy API Endpoint

MGYG000309887’s cluster representative (MGYG000314149) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000314149’s sequence. Because MGYG000309887 has been clustered with MGYG000314149 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309887.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000314149

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571808	SAMEA112905029	Control
1.00	SAMEA7697623	SAMEA112905102	Probiotic
1.00	SAMEA9449905	SAMEA112905226	Prebiotic
1.00	SAMEA7025248	SAMEA112905319	Probiotic
0.99	SAMEA7571800	SAMEA112904785	Probiotic
0.99	SAMEA10455485	SAMEA112904918	Control
0.99	SAMEA10105019	SAMEA112905196	Control
0.99	SAMEA7697592	SAMEA112904737	Control
0.99	SAMEA9449899	SAMEA112905067	Prebiotic
0.99	SAMEA10105008	SAMEA112905030	Control