MGYG000309476

Taxonomy

Anaerotignum lactatifermentans Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Anaerotignaceae > Anaerotignum > Anaerotignum lactatifermentans

Cluster representative

MGYG000312529

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312529 on MGnify
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Annotations

MGYG000309476’s cluster representative genome MGYG000312529 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312529 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309476 Copy API Endpoint

MGYG000309476’s cluster representative (MGYG000312529) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312529’s sequence. Because MGYG000309476 has been clustered with MGYG000312529 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309476.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312529

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA14099425	SAMEA112905180	Prebiotic
1.00	SAMEA7697588	SAMEA112905360	Probiotic
1.00	SAMEA7571766	SAMEA112905028	Control
1.00	SAMEA9449869	SAMEA112905176	Prebiotic
1.00	SAMEA7571767	SAMEA112905143	Control
1.00	SAMEA10105005	SAMEA112904853	Probiotic
1.00	SAMEA7571782	SAMEA112904984	Prebiotic
1.00	SAMEA7571863	SAMEA112905012	Probiotic
1.00	SAMEA7571827	SAMEA112905382	Probiotic
1.00	SAMEA10145572	SAMEA112905165	Control