HoloFood Data Portal

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MGYG000308877

Details for MGYG000308877, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Heritagella sp905215105 Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Heritagella > Heritagella sp905215105
Cluster representative

MGYG000317148

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317148 on MGnify
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Annotations

MGYG000308877’s cluster representative genome MGYG000317148 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317148 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308877 Copy API Endpoint
Samples containing this genome

MGYG000308877’s cluster representative (MGYG000317148) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317148’s sequence. Because MGYG000308877 has been clustered with MGYG000317148 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308877.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317148

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Containment Sample accession Animal accession Treatment
0.22 SAMEA10105032 Control
0.22 SAMEA10454448 Prebiotic
0.21 SAMEA7571772 Prebiotic
0.21 SAMEA9449927 Prebiotic
0.21 SAMEA9449943 Control
0.21 SAMEA14099421 Control
0.20 SAMEA7697618 Prebiotic
0.20 SAMEA7697591 Probiotic
0.20 SAMEA10104978 Control
0.20 SAMEA9449872 Prebiotic