MGYG000308616

Taxonomy

Heritagella gallinarum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Heritagella > Heritagella gallinarum

Cluster representative

MGYG000310347

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310347 on MGnify
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Annotations

MGYG000308616’s cluster representative genome MGYG000310347 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310347 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308616 Copy API Endpoint

MGYG000308616’s cluster representative (MGYG000310347) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310347’s sequence. Because MGYG000308616 has been clustered with MGYG000310347 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308616.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310347

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA10104992	SAMEA112905146	Prebiotic
0.21	SAMEA10145587	SAMEA112905124	Control
0.20	SAMEA9449878	SAMEA112904817	Control
0.20	SAMEA10104977	SAMEA112905312	Control
0.20	SAMEA10104908	SAMEA112905066	Control
0.20	SAMEA10145572	SAMEA112905165	Control