MGYG000308531

Taxonomy

Eisenbergiella merdigallinarum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Eisenbergiella > Eisenbergiella merdigallinarum

Cluster representative

MGYG000313574

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313574 on MGnify
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Annotations

MGYG000308531’s cluster representative genome MGYG000313574 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313574 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308531 Copy API Endpoint

MGYG000308531’s cluster representative (MGYG000313574) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313574’s sequence. Because MGYG000308531 has been clustered with MGYG000313574 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308531.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313574

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Containment	Sample accession	Animal accession	Treatment
0.22	SAMEA10145579	SAMEA112904838	Control
0.22	SAMEA10159244	SAMEA112905364	Probiotic
0.22	SAMEA10104987	SAMEA112905189	Control
0.21	SAMEA7571812	SAMEA112905208	Control
0.21	SAMEA7697623	SAMEA112905102	Probiotic
0.20	SAMEA7571863	SAMEA112905012	Probiotic