MGYG000308410

Taxonomy

Borkfalkia stercoripullorum Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Borkfalkia > Borkfalkia stercoripullorum

Cluster representative

MGYG000317548

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317548 on MGnify
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Annotations

MGYG000308410’s cluster representative genome MGYG000317548 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317548 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308410 Copy API Endpoint

MGYG000308410’s cluster representative (MGYG000317548) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317548’s sequence. Because MGYG000308410 has been clustered with MGYG000317548 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308410.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317548

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA10104955	SAMEA112904953	Control
0.21	SAMEA7697578	SAMEA112905016	Control
0.21	SAMEA7571813	SAMEA112905264	Prebiotic
0.21	SAMEA7025283	SAMEA112904873	Control
0.21	SAMEA7571867	SAMEA112905129	Control
0.20	SAMEA7571864	SAMEA112904748	Probiotic