HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112949870: a HoloFood salmon host

Data available for SAMEA112949870


Animal details
System
salmon
Samples
G Has metagenomic data
Has metagenomic data
T Has metatranscriptome data
Has metatranscriptome data
Has metabolomic data Has metabolomic data
I Has iodine data
Has iodine data
F Has fatty acids data
Has fatty acids data
H Has heavy metals data
Has heavy metal data
Has host genomic data Has host genomic data
Has transcriptome data Has transcriptome data
View 9 derived samples
API endpoint
/api/animals/SAMEA112949870 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112949870, stored in BioSamples.

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Sample metadata

Marker Measurement Units
Animal code SA10.25 None
Organism Salmon None
Project HoloFood None
Salmon body length 36 cm
Salmon gutted weight 495.6 g
Salmon live weight 573.4 g
Sampling time Day 60 None
Wound NO None

Tank metadata

Marker Measurement Units
Average end weight 570.8 g
Average start weight 301.3 g
End of sampling (No. of fish) 20 None
Feed conversion ratio 1.04 feed mass/fish weight gain
Mid sampling (No. of fish) 5 None
Mortality (No. of fish) 1 None
Standard growth rate 1.11 None
Start of sampling (No. of fish) 160 None
Tank code SA10 None
The thermal growth coefficient 2.13 None
Total end of sampling biomass 12011 g
Total end weight 73062 g
Total mid sampling biomass 1971 g
Total start biomass 48205 g

Treatment metadata

Marker Measurement Units
Analyzed Energy (bomb calorimetry) 22.84 MJ/kg
Analyzed Fat 24.5 None
Analyzed Moisture 5.9 %
Analyzed Protein 43.6 None
Analyzed Yttrium 433 mg/kg
Fish Meal 14.7 %
Fish Oil 17.5 %
Guar Meal 12.7 %
Rapeseed Oil 5.1 %
Soy SPC 19.8 %
Target Energy (crude) 23.3 MJ/kg
Target Fat 26.1 None
Target Moisture 6.1 %
Target Protein (crude) 42.3 %
Treatment code Jaguar None
Treatment concentration 2.0% %
Treatment description Fermented algae meal (added in in oil coating) None
Vit + min + AA 4.7 %
Water Change 0.5 %
Wheat 10.8 %
Wheat Gluten 12.4 %
Yttrium 0.1 %

Treatment Fatty Acids Mg metadata

Marker Measurement Units
Sum 16:1 4.26 mg/g
Sum 18:1 37.4 mg/g
Sum 20:1 5.14 mg/g
Sum 22:1 4.94 mg/g
Sum EPA+DHA 15.5 mg/g
Sum fatty acids 118 mg/g
Sum identified 116 mg/g
Sum monounsaturate 52.6 mg/g
Sum n-3 24.4 mg/g
Sum n-6 14 mg/g
Sum polyunsaturated 38.6 mg/g
Sum saturated 24.3 mg/g
Sum unidentified 2.51 mg/g
16:2n-4 0.29 mg/g
16:4n-3 0.28 mg/g
18:1n-11 0.32 mg/g
21:5n-3 0.25 mg/g
22:1n-11 4.44 mg/g
Adrenic acid 22:4n-6 <0.01 mg/g
Alpha-Linolenic acid 18:3n-3 3.83 mg/g
Arachidic acid 20:0 0.31 mg/g
Arachidonic acid 20:4n-6 (ARA) 0.78 mg/g
Behenic acid 22:0 0.18 mg/g
Capric acid 10:0 <0.01 mg/g
Caproic acid 6:0 <0.01 mg/g
Caprylic acid 8:0 <0.01 mg/g
Di-homo-gamma-linolenic acid 20:3n-6 0.34 mg/g
Docosahexaenoic acid 22:6n-3 (DHA) 11.16 mg/g
Docosapentaenoic acid 22:5n-3 (DPA) 1.63 mg/g
Eicosadienoic acid 20:2n-6 0.95 mg/g
Eicosapentaenoic acid 20:5n-3 (EPA) 4.31 mg/g
Eicosatetraenoic acid 20:4n-3 0.96 mg/g
Eicosatrienoic acid 20:3n-3 <0.01 mg/g
Eicosenoic acid 20:1n-9 4.58 mg/g
Erucic acid 22:1n-9 0.5 mg/g
Gadoleic acid 20:1n-11 0.41 mg/g
Gamma-Linolenic acid 18:3n-6 0.16 mg/g
Hexadecatrienoic acid 16:3n-3 <0.01 mg/g
Hypogeic acid 16:1n-9 0.38 mg/g
Lauric acid 12:0 <0.01 mg/g
Lignoceric acid 24:0 0.14 mg/g
Linoleic acid 18:2n-6 11.55 mg/g
Margaric acid 17:0 0.31 mg/g
Mead acid 20:3n-9 <0.01 mg/g
Myristic acid 14:0 3.83 mg/g
Myristoleic acid 14:1n-9 0.14 mg/g
Nervonic acid 24:1n-9 0.69 mg/g
Oleic acid 18:1n-9 33.66 mg/g
Osbond acid 22:5n-6 0.2 mg/g
Palmitic acid 16:0 15.64 mg/g
Palmitoleic acid 16:1n-7 3.88 mg/g
Paullinic acid 20:1n-7 0.15 mg/g
Pentadecylic acid 15:0 0.34 mg/g
Stearic acid 18:0 3.59 mg/g
Stearidonic acid 18:4n-3 1.4 mg/g
Tetracosahexaenoic acid 24:6n-3 0.32 mg/g
Tetracosapentaenoic acid 24:5n-3 0.23 mg/g
Vaccenic acid 18:1n-7 3.44 mg/g
n-3/n-6 3,0 mg/g
n-6/n-3 0,3 mg/g

Treatment Fatty Acids Percentage metadata

Marker Measurement Units
Sum 16:1 4.26 %
Sum 18:1 37.4 %
Sum 20:1 5.14 %
Sum 22:1 4.94 %
Sum EPA+DHA 15.5 %
Sum fatty acids 118 %
Sum identified 116 %
Sum monounsaturate 52.6 %
Sum n-3 24.4 %
Sum n-6 14 %
Sum polyunsaturated 38.6 %
Sum saturated 24.3 %
Sum unidentified 2.51 %
16:2n-4 0.29 %
16:4n-3 0.28 %
18:1n-11 0.32 %
21:5n-3 0.25 %
22:1n-11 4.44 %
Adrenic acid 22:4n-6 <0.01 %
Alpha-Linolenic acid 18:3n-3 3.83 %
Arachidic acid 20:0 0.31 %
Arachidonic acid 20:4n-6 (ARA) 0.78 %
Behenic acid 22:0 0.18 %
Capric acid 10:0 <0.01 %
Caproic acid 6:0 <0.01 %
Caprylic acid 8:0 <0.01 %
Di-homo-gamma-linolenic acid 20:3n-6 0.34 %
Docosahexaenoic acid 22:6n-3 (DHA) 11.16 %
Docosapentaenoic acid 22:5n-3 (DPA) 1.63 %
Eicosadienoic acid 20:2n-6 0.95 %
Eicosapentaenoic acid 20:5n-3 (EPA) 4.31 %
Eicosatetraenoic acid 20:4n-3 0.96 %
Eicosatrienoic acid 20:3n-3 <0.01 %
Eicosenoic acid 20:1n-9 4.58 %
Erucic acid 22:1n-9 0.5 %
Gadoleic acid 20:1n-11 0.41 %
Gamma-Linolenic acid 18:3n-6 0.16 %
Hexadecatrienoic acid 16:3n-3 <0.01 %
Hypogeic acid 16:1n-9 0.38 %
Lauric acid 12:0 <0.01 %
Lignoceric acid 24:0 0.14 %
Linoleic acid 18:2n-6 11.55 %
Margaric acid 17:0 0.31 %
Mead acid 20:3n-9 <0.01 %
Myristic acid 14:0 3.83 %
Myristoleic acid 14:1n-9 0.14 %
Nervonic acid 24:1n-9 0.69 %
Oleic acid 18:1n-9 33.66 %
Osbond acid 22:5n-6 0.2 %
Palmitic acid 16:0 15.64 %
Palmitoleic acid 16:1n-7 3.88 %
Paullinic acid 20:1n-7 0.15 %
Pentadecylic acid 15:0 0.34 %
Stearic acid 18:0 3.59 %
Stearidonic acid 18:4n-3 1.4 %
Tetracosahexaenoic acid 24:6n-3 0.32 %
Tetracosapentaenoic acid 24:5n-3 0.23 %
Vaccenic acid 18:1n-7 3.44 %
n-3/n-6 3,0 %
n-6/n-3 0,3 %

Trial metadata

Marker Measurement Units
Environment Tanks (flow-through) None
Trial code SA None
Trial description Trial A: Seaweed-dose response None
Trial end 2019-08-13 None
Trial start 2019-06-11 None