HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112948800: a HoloFood salmon host

Data available for SAMEA112948800


Animal details
System
salmon
Samples
G Has metagenomic data
Has metagenomic data
T Has metatranscriptome data
Has metatranscriptome data
F Has fatty acids data
Has fatty acids data
Has host genomic data Has host genomic data
Has transcriptome data Has transcriptome data
View 5 derived samples
API endpoint
/api/animals/SAMEA112948800 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112948800, stored in BioSamples.

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Sample metadata

Marker Measurement Units
Animal code SB01.13 None
Organism Salmon None
Project HoloFood None
Salmon body length 33.1 cm
Salmon gutted weight 358.6 g
Salmon live weight 421 g
Sampling time Day 60 None
Wound NO None

Tank metadata

Marker Measurement Units
Average end weight 444.4 g
Average start weight 216.4 g
End of sampling (No. of fish) 20 None
Feed conversion ratio 0.83 feed mass/fish weight gain
Mid sampling (No. of fish) 5 None
Mortality (No. of fish) 3 None
Standard growth rate 1.5 None
Start of sampling (No. of fish) 180 None
Tank code SB01 None
The thermal growth coefficient 2.62 None
Total end of sampling biomass 8805 g
Total end weight 66659 g
Total mid sampling biomass 1914 g
Total start biomass 38948 g

Treatment metadata

Marker Measurement Units
Analyzed Energy (bomb calorimetry) 21.9 MJ/kg
Analyzed Fat 26.3 None
Analyzed Moisture 6.6 %
Analyzed Protein 42.9 None
Analyzed Yttrium 392 mg/kg
Fish Meal 30 %
Fish Oil 10.34 %
Lecithin Soy 0.8 %
Pea Protein 8.91 %
Rapeseed Oil 10.44 %
Soy SPC 12 %
Target Energy (crude) 20.1 MJ/kg
Target Fat 26 None
Target Moisture 6 %
Target Protein (crude) 43.8 %
Treatment code Mars None
Treatment concentration 0.0% %
Treatment description Sanford Blue Mussel Meal None
Vit + min + AA 2.77 %
Water Change -0.96 %
Wheat 16.39 %
Wheat Gluten 9.26 %
Yttrium 0.05 %

Treatment Fatty Acids Mg metadata

Marker Measurement Units
Sum 16:1 2.6 mg/g
Sum 18:1 29.2 mg/g
Sum 20:1 2.61 mg/g
Sum 22:1 2.09 mg/g
Sum EPA+DHA 11.1 mg/g
Sum fatty acids 84.3 mg/g
Sum identified 82.4 mg/g
Sum monounsaturate 37 mg/g
Sum n-3 17.3 mg/g
Sum n-6 11.3 mg/g
Sum polyunsaturated 28.8 mg/g
Sum saturated 16.3 mg/g
Sum unidentified 1.92 mg/g
16:2n-4 0.21 mg/g
16:4n-3 <0.01 mg/g
18:1n-11 0.19 mg/g
21:5n-3 <0.01 mg/g
22:1n-11 1.75 mg/g
Adrenic acid 22:4n-6 <0.01 mg/g
Alpha-Linolenic acid 18:3n-3 3.22 mg/g
Arachidic acid 20:0 0.22 mg/g
Arachidonic acid 20:4n-6 (ARA) 0.67 mg/g
Behenic acid 22:0 0.12 mg/g
Capric acid 10:0 <0.01 mg/g
Caproic acid 6:0 <0.01 mg/g
Caprylic acid 8:0 <0.01 mg/g
Di-homo-gamma-linolenic acid 20:3n-6 0.19 mg/g
Docosahexaenoic acid 22:6n-3 (DHA) 7.4 mg/g
Docosapentaenoic acid 22:5n-3 (DPA) 1.47 mg/g
Eicosadienoic acid 20:2n-6 0.69 mg/g
Eicosapentaenoic acid 20:5n-3 (EPA) 3.67 mg/g
Eicosatetraenoic acid 20:4n-3 0.65 mg/g
Eicosatrienoic acid 20:3n-3 <0.01 mg/g
Eicosenoic acid 20:1n-9 2.42 mg/g
Erucic acid 22:1n-9 0.34 mg/g
Gadoleic acid 20:1n-11 0.19 mg/g
Gamma-Linolenic acid 18:3n-6 <0.01 mg/g
Hexadecatrienoic acid 16:3n-3 0.11 mg/g
Hypogeic acid 16:1n-9 0.2 mg/g
Lauric acid 12:0 <0.01 mg/g
Lignoceric acid 24:0 <0.01 mg/g
Linoleic acid 18:2n-6 9.6 mg/g
Margaric acid 17:0 0.17 mg/g
Mead acid 20:3n-9 <0.01 mg/g
Myristic acid 14:0 2.31 mg/g
Myristoleic acid 14:1n-9 <0.01 mg/g
Nervonic acid 24:1n-9 0.54 mg/g
Oleic acid 18:1n-9 25.67 mg/g
Osbond acid 22:5n-6 0.13 mg/g
Palmitic acid 16:0 10.64 mg/g
Palmitoleic acid 16:1n-7 2.4 mg/g
Paullinic acid 20:1n-7 <0.01 mg/g
Pentadecylic acid 15:0 0.2 mg/g
Stearic acid 18:0 2.6 mg/g
Stearidonic acid 18:4n-3 0.52 mg/g
Tetracosahexaenoic acid 24:6n-3 0.12 mg/g
Tetracosapentaenoic acid 24:5n-3 0.17 mg/g
Vaccenic acid 18:1n-7 3.3 mg/g
n-3/n-6 1,6 mg/g
n-6/n-3 0,6 mg/g

Treatment Fatty Acids Percentage metadata

Marker Measurement Units
Sum 16:1 2.6 %
Sum 18:1 29.2 %
Sum 20:1 2.61 %
Sum 22:1 2.09 %
Sum EPA+DHA 11.1 %
Sum fatty acids 84.3 %
Sum identified 82.4 %
Sum monounsaturate 37 %
Sum n-3 17.3 %
Sum n-6 11.3 %
Sum polyunsaturated 28.8 %
Sum saturated 16.3 %
Sum unidentified 1.92 %
16:2n-4 0.21 %
16:4n-3 <0.01 %
18:1n-11 0.19 %
21:5n-3 <0.01 %
22:1n-11 1.75 %
Adrenic acid 22:4n-6 <0.01 %
Alpha-Linolenic acid 18:3n-3 3.22 %
Arachidic acid 20:0 0.22 %
Arachidonic acid 20:4n-6 (ARA) 0.67 %
Behenic acid 22:0 0.12 %
Capric acid 10:0 <0.01 %
Caproic acid 6:0 <0.01 %
Caprylic acid 8:0 <0.01 %
Di-homo-gamma-linolenic acid 20:3n-6 0.19 %
Docosahexaenoic acid 22:6n-3 (DHA) 7.4 %
Docosapentaenoic acid 22:5n-3 (DPA) 1.47 %
Eicosadienoic acid 20:2n-6 0.69 %
Eicosapentaenoic acid 20:5n-3 (EPA) 3.67 %
Eicosatetraenoic acid 20:4n-3 0.65 %
Eicosatrienoic acid 20:3n-3 <0.01 %
Eicosenoic acid 20:1n-9 2.42 %
Erucic acid 22:1n-9 0.34 %
Gadoleic acid 20:1n-11 0.19 %
Gamma-Linolenic acid 18:3n-6 <0.01 %
Hexadecatrienoic acid 16:3n-3 0.11 %
Hypogeic acid 16:1n-9 0.2 %
Lauric acid 12:0 <0.01 %
Lignoceric acid 24:0 <0.01 %
Linoleic acid 18:2n-6 9.6 %
Margaric acid 17:0 0.17 %
Mead acid 20:3n-9 <0.01 %
Myristic acid 14:0 2.31 %
Myristoleic acid 14:1n-9 <0.01 %
Nervonic acid 24:1n-9 0.54 %
Oleic acid 18:1n-9 25.67 %
Osbond acid 22:5n-6 0.13 %
Palmitic acid 16:0 10.64 %
Palmitoleic acid 16:1n-7 2.4 %
Paullinic acid 20:1n-7 <0.01 %
Pentadecylic acid 15:0 0.2 %
Stearic acid 18:0 2.6 %
Stearidonic acid 18:4n-3 0.52 %
Tetracosahexaenoic acid 24:6n-3 0.12 %
Tetracosapentaenoic acid 24:5n-3 0.17 %
Vaccenic acid 18:1n-7 3.3 %
n-3/n-6 1,6 %
n-6/n-3 0,6 %

Trial metadata

Marker Measurement Units
Environment Tanks (flow-through) None
Trial code SB None
Trial description Trial B: Blue mussel-dose response None
Trial end 2019-11-22 None
Trial start 2019-08-14 None