HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905381: a HoloFood chicken host

Data available for SAMEA112905381


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112905381 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905381, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 20.69 g
Average Daily Feed intake: Day 00 - 35 77.21 g
Average Daily Feed intake: Day 07 - 21 78.62 g
Average Daily Feed intake: Day 21 - 35 106.15 g
Average Daily Gain: Day 00 - 07 21.14 g
Average Daily Gain: Day 00 - 35 48.55 g
Average Daily Gain: Day 07 - 21 47.5 g
Average Daily Gain: Day 21 - 35 63.3 g
Average European Performance Efficiency Factor: Day 00 - 07 215.98 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.655 None
Average Feed to Conversion Ratio: Day 07 - 21 1.655 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 45.12 g
Average body weight at day 07 193.11 g
Average body weight at day 21 858.06 g
Average body weight at day 35 1744.2 g
European Performance Efficiency Factor: Day 00 - 35 305.23 None
European Performance Efficiency Factor: Day 07 - 21 286.94 None
European Performance Efficiency Factor: Day 21 - 35 377.44 None
FCR (not corrected): Day 00 - 07 0.979 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.59 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.677 None
Feed to Conversion Ratio: Day 00 - 07 0.979 g/g
Feed to Conversion Ratio: Day 00 - 35 1.59 g/g
Feed to Conversion Ratio: Day 21 - 35 1.677 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 6.1 pH
Litter at Day 21 7.49 pH
Litter at Day 35 8.06 pH
Mean Abdominal fat Yield 0.68 %
Mean Abdominal fat weight 12.48 g
Mean Breast Yield 15.62 %
Mean Breast weight 286.23 g
Mean CRP at Day 07 2.2943 pg/mg
Mean CRP at Day 21 2.2607 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1334.5 g
Mean Carcass Yield 73.16 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.59161 ng/ml
Mean HPT at Day 35 0.73114 ng/ml
Mean LPS at Day 07 4.6959 ng/L
Mean LPS at Day 21 3.5134 ng/L
Mean LPS at Day 35 3.3223 ng/L
Mean Legs Yield 21.2 %
Mean Legs weight 386.73 g
Mean TBARS 0.0367 mg MDA/kg
Mean carcass body weight 1825 g
Mean feather cortisol at Day 07 7.925 pg/mg
Mean feather cortisol at Day 21 7.535 pg/mg
Mean feather cortisol at Day 35 7.6733 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CC07 None

Sample metadata

Marker Measurement Units
Animal code CC07.06 None
Breed Ross None
C-Reactive protein 4.94 pg/ml
Chicken body weight 184.4 g
Feather cortisol 5.94 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 18.5 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None