HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905348: a HoloFood chicken host

Data available for SAMEA112905348


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 6 derived samples
API endpoint
/api/animals/SAMEA112905348 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905348, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.32 g
Average Daily Feed intake: Day 00 - 35 93.76 g
Average Daily Feed intake: Day 07 - 21 63.65 g
Average Daily Feed intake: Day 21 - 35 166.63 g
Average Daily Gain: Day 00 - 07 17.34 g
Average Daily Gain: Day 00 - 35 60.97 g
Average Daily Gain: Day 07 - 21 51.04 g
Average Daily Gain: Day 21 - 35 92.72 g
Average European Performance Efficiency Factor: Day 00 - 07 155.56 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.247 None
Average Feed to Conversion Ratio: Day 07 - 21 1.247 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 42.55 g
Average body weight at day 07 163.9 g
Average body weight at day 21 878.47 g
Average body weight at day 35 2176.6 g
European Performance Efficiency Factor: Day 00 - 35 386.58 None
European Performance Efficiency Factor: Day 07 - 21 409.32 None
European Performance Efficiency Factor: Day 21 - 35 500.77 None
FCR (not corrected): Day 00 - 07 1.114 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.561 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.847 None
Feed to Conversion Ratio: Day 00 - 07 1.114 g/g
Feed to Conversion Ratio: Day 00 - 35 1.538 g/g
Feed to Conversion Ratio: Day 21 - 35 1.797 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=5.88 P1=44.12 P2=32.35 P3=14.71 P4=2.94 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=50.00 P1=29.17 P2=20.83 P3=0.00 P4=0.00 %
Litter at Day 07 5.98 pH
Litter at Day 21 6.76 pH
Litter at Day 35 7.35 pH
Mean Abdominal fat Yield 1.87 %
Mean Abdominal fat weight 43.05 g
Mean Breast Yield 21 %
Mean Breast weight 484.98 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1777.2 g
Mean Carcass Yield 77.13 %
Mean HPT at Day 07 1.7883 ng/ml
Mean HPT at Day 21 0.65112 ng/ml
Mean HPT at Day 35 0.95639 ng/ml
Mean LPS at Day 07 3.6532 ng/L
Mean LPS at Day 21 2.9732 ng/L
Mean LPS at Day 35 2.9732 ng/L
Mean Legs Yield 19.41 %
Mean Legs weight 445.92 g
Mean TBARS 0.0467 mg MDA/kg
Mean carcass body weight 2303.7 g
Mean feather cortisol at Day 07 12.413 pg/mg
Mean feather cortisol at Day 21 11.61 pg/mg
Mean feather cortisol at Day 35 11.2 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 2.94 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 2.94 %
Pen code CA09 None

Sample metadata

Marker Measurement Units
Animal code CA09.06 None
Breed Cobb None
C-Reactive protein 0.36 pg/ml
Chicken body weight 146.2 g
Feather cortisol 15.78 pg/mg
Haptoglobin 465.25 ng/ml
Lipopolysaccharide 12.67 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None