HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905236: a HoloFood chicken host

Data available for SAMEA112905236


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 5 derived samples
API endpoint
/api/animals/SAMEA112905236 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905236, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 18.72 g
Average Daily Feed intake: Day 00 - 35 93.33 g
Average Daily Feed intake: Day 07 - 21 60.43 g
Average Daily Feed intake: Day 21 - 35 167.96 g
Average Daily Gain: Day 00 - 07 17.85 g
Average Daily Gain: Day 00 - 35 61.9 g
Average Daily Gain: Day 07 - 21 49.04 g
Average Daily Gain: Day 21 - 35 96.78 g
Average European Performance Efficiency Factor: Day 00 - 07 170.14 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.232 None
Average Feed to Conversion Ratio: Day 07 - 21 1.232 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.15 g
Average body weight at day 07 164.08 g
Average body weight at day 21 850.65 g
Average body weight at day 35 2205.6 g
European Performance Efficiency Factor: Day 00 - 35 400.28 None
European Performance Efficiency Factor: Day 07 - 21 398.01 None
European Performance Efficiency Factor: Day 21 - 35 541.27 None
FCR (not corrected): Day 00 - 07 1.049 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.549 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.82 None
Feed to Conversion Ratio: Day 00 - 07 1.049 g/g
Feed to Conversion Ratio: Day 00 - 35 1.508 g/g
Feed to Conversion Ratio: Day 21 - 35 1.735 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=58.82 P1=20.59 P2=20.59 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=50.00 P1=37.50 P2=12.50 P3=0.00 P4=0.00 %
Litter at Day 07 8.18 pH
Litter at Day 21 8.31 pH
Litter at Day 35 6.92 pH
Mean Abdominal fat Yield 1.49 %
Mean Abdominal fat weight 36.88 g
Mean Breast Yield 18.26 %
Mean Breast weight 454.33 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1898.9 g
Mean Carcass Yield 76.54 %
Mean HPT at Day 07 0.83476 ng/ml
Mean HPT at Day 21 0.67634 ng/ml
Mean HPT at Day 35 0.70451 ng/ml
Mean LPS at Day 07 3.5823 ng/L
Mean LPS at Day 21 3.069 ng/L
Mean LPS at Day 35 3.077 ng/L
Mean Legs Yield 21.05 %
Mean Legs weight 522.3 g
Mean TBARS 0.0467 mg MDA/kg
Mean carcass body weight 2482.8 g
Mean feather cortisol at Day 07 14.815 pg/mg
Mean feather cortisol at Day 21 10.738 pg/mg
Mean feather cortisol at Day 35 13.643 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 2.94 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 2.94 %
Pen code CA08 None

Sample metadata

Marker Measurement Units
Animal code CA08.03 None
Breed Ross None
C-Reactive protein 0.3 pg/ml
Chicken body weight 121.8 g
Feather cortisol 14.05 pg/mg
Haptoglobin 101.36 ng/ml
Lipopolysaccharide 12.71 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None