HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905217: a HoloFood chicken host

Data available for SAMEA112905217


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has histological data Has histological data
Has host genomic data Has host genomic data
View 8 derived samples
API endpoint
/api/animals/SAMEA112905217 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905217, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.46 g
Average Daily Feed intake: Day 00 - 35 70.94 g
Average Daily Feed intake: Day 07 - 21 66.05 g
Average Daily Feed intake: Day 21 - 35 102.93 g
Average Daily Gain: Day 00 - 07 21.48 g
Average Daily Gain: Day 00 - 35 48.65 g
Average Daily Gain: Day 07 - 21 46.09 g
Average Daily Gain: Day 21 - 35 64.8 g
Average European Performance Efficiency Factor: Day 00 - 07 215.04 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.433 None
Average Feed to Conversion Ratio: Day 07 - 21 1.433 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 41.52 g
Average body weight at day 07 191.89 g
Average body weight at day 21 837.1 g
Average body weight at day 35 1744.2 g
European Performance Efficiency Factor: Day 00 - 35 333.61 None
European Performance Efficiency Factor: Day 07 - 21 321.57 None
European Performance Efficiency Factor: Day 21 - 35 407.9 None
FCR (not corrected): Day 00 - 07 0.999 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.458 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.588 None
Feed to Conversion Ratio: Day 00 - 07 0.999 g/g
Feed to Conversion Ratio: Day 00 - 35 1.458 g/g
Feed to Conversion Ratio: Day 21 - 35 1.588 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=85.71 P1=14.29 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=79.17 P1=16.67 P2=4.17 P3=0.00 P4=0.00 %
Litter at Day 07 6.61 pH
Litter at Day 21 8.23 pH
Litter at Day 35 8.52 pH
Mean Abdominal fat Yield 1.45 %
Mean Abdominal fat weight 27.2 g
Mean Breast Yield 15.77 %
Mean Breast weight 294.6 g
Mean CRP at Day 07 1.5992 pg/mg
Mean CRP at Day 21 1.9198 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1408.4 g
Mean Carcass Yield 75.33 %
Mean HPT at Day 07 0.8516 ng/ml
Mean HPT at Day 21 0.75483 ng/ml
Mean HPT at Day 35 0.59161 ng/ml
Mean LPS at Day 07 6.4329 ng/L
Mean LPS at Day 21 3.3104 ng/L
Mean LPS at Day 35 6.9271 ng/L
Mean Legs Yield 21.48 %
Mean Legs weight 401.9 g
Mean TBARS 0.025 mg MDA/kg
Mean carcass body weight 1870 g
Mean feather cortisol at Day 07 7.2027 pg/mg
Mean feather cortisol at Day 21 5.545 pg/mg
Mean feather cortisol at Day 35 18.103 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CC22 None

Sample metadata

Marker Measurement Units
Animal code CC22.10 None
Breed Ross None
C-Reactive protein 3.51 pg/ml
Chicken body weight 788 g
Feather cortisol 2.87 pg/mg
Haptoglobin 38.76 ng/ml
Lipopolysaccharide 12.8 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 21 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None