HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905052: a HoloFood chicken host

Data available for SAMEA112905052


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905052 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905052, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 18.18 g
Average Daily Feed intake: Day 00 - 35 92.56 g
Average Daily Feed intake: Day 07 - 21 74.05 g
Average Daily Feed intake: Day 21 - 35 152.91 g
Average Daily Gain: Day 00 - 07 19.45 g
Average Daily Gain: Day 00 - 35 60.89 g
Average Daily Gain: Day 07 - 21 52.36 g
Average Daily Gain: Day 21 - 35 90.14 g
Average European Performance Efficiency Factor: Day 00 - 07 208.13 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.464 None
Average Feed to Conversion Ratio: Day 07 - 21 1.414 g/g
Average Mortality without culleds: Day 07 - 21 5 %
Average body weight at day 00 38.84 g
Average body weight at day 07 175 g
Average body weight at day 21 908.06 g
Average body weight at day 35 2170 g
European Performance Efficiency Factor: Day 00 - 35 370.51 None
European Performance Efficiency Factor: Day 07 - 21 342.49 None
European Performance Efficiency Factor: Day 21 - 35 531.34 None
FCR (not corrected): Day 00 - 07 0.935 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.54 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.696 None
Feed to Conversion Ratio: Day 00 - 07 0.935 g/g
Feed to Conversion Ratio: Day 00 - 35 1.52 g/g
Feed to Conversion Ratio: Day 21 - 35 1.696 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=96.00 P1=4.00 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 6.63 pH
Litter at Day 21 7.86 pH
Litter at Day 35 7.72 pH
Mean Abdominal fat Yield 1.25 %
Mean Abdominal fat weight 33.02 g
Mean Breast Yield 18.75 %
Mean Breast weight 497.32 g
Mean CRP at Day 07 1.8683 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0972 pg/mg
Mean Carcass Weight 1998.7 g
Mean Carcass Yield 75.57 %
Mean HPT at Day 07 1.6023 ng/ml
Mean HPT at Day 21 0.73951 ng/ml
Mean HPT at Day 35 0.90351 ng/ml
Mean LPS at Day 07 7.0573 ng/L
Mean LPS at Day 21 4.549 ng/L
Mean LPS at Day 35 4.3128 ng/L
Mean Legs Yield 20.22 %
Mean Legs weight 533.6 g
Mean TBARS 0.0733 mg MDA/kg
Mean carcass body weight 2642.5 g
Mean feather cortisol at Day 07 14.428 pg/mg
Mean feather cortisol at Day 21 10.24 pg/mg
Mean feather cortisol at Day 35 13.065 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 5 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 7.5 %
Mortality: Day 07 - 21 7.5 %
Mortality: Day 21 - 35 0 %
Pen code CB12 None

Sample metadata

Marker Measurement Units
Animal code CB12.06 None
Breed Ross None
C-Reactive protein 4.22 pg/ml
Chicken body weight 224 g
Feather cortisol 11.35 pg/mg
Haptoglobin 846.52 ng/ml
Lipopolysaccharide 47 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None