HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905039: a HoloFood chicken host

Data available for SAMEA112905039


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905039 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905039, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 20.61 g
Average Daily Feed intake: Day 00 - 35 98.16 g
Average Daily Feed intake: Day 07 - 21 80.17 g
Average Daily Feed intake: Day 21 - 35 158.43 g
Average Daily Gain: Day 00 - 07 18.38 g
Average Daily Gain: Day 00 - 35 64.11 g
Average Daily Gain: Day 07 - 21 57.18 g
Average Daily Gain: Day 21 - 35 93.9 g
Average European Performance Efficiency Factor: Day 00 - 07 164.01 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.412 None
Average Feed to Conversion Ratio: Day 07 - 21 1.402 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 45.06 g
Average body weight at day 07 173.75 g
Average body weight at day 21 974.24 g
Average body weight at day 35 2288.9 g
European Performance Efficiency Factor: Day 00 - 35 408.24 None
European Performance Efficiency Factor: Day 07 - 21 397.62 None
European Performance Efficiency Factor: Day 21 - 35 556.59 None
FCR (not corrected): Day 00 - 07 1.121 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.536 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.687 None
Feed to Conversion Ratio: Day 00 - 07 1.121 g/g
Feed to Conversion Ratio: Day 00 - 35 1.531 g/g
Feed to Conversion Ratio: Day 21 - 35 1.687 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=92.59 P1=7.41 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 8.5 pH
Litter at Day 21 6.65 pH
Litter at Day 35 8.22 pH
Mean Abdominal fat Yield 1.39 %
Mean Abdominal fat weight 34.25 g
Mean Breast Yield 20.7 %
Mean Breast weight 498.65 g
Mean CRP at Day 07 2.3864 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1856 g
Mean Carcass Yield 77.07 %
Mean HPT at Day 07 1.533 ng/ml
Mean HPT at Day 21 0.77839 ng/ml
Mean HPT at Day 35 1.4371 ng/ml
Mean LPS at Day 07 6.8627 ng/L
Mean LPS at Day 21 5.5839 ng/L
Mean LPS at Day 35 5.7268 ng/L
Mean Legs Yield 19.97 %
Mean Legs weight 480.37 g
Mean TBARS 0.1067 mg MDA/kg
Mean carcass body weight 2409.2 g
Mean feather cortisol at Day 07 9.455 pg/mg
Mean feather cortisol at Day 21 30.837 pg/mg
Mean feather cortisol at Day 35 10.92 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB03 None

Sample metadata

Marker Measurement Units
Animal code CB03.05 None
Breed Cobb None
C-Reactive protein 7.6 pg/ml
Chicken body weight 226.2 g
Feather cortisol 8.9 pg/mg
Haptoglobin 2.86 ng/ml
Lipopolysaccharide 43.95 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None