HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905022: a HoloFood chicken host

Data available for SAMEA112905022


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905022 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905022, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 18.05 g
Average Daily Feed intake: Day 00 - 35 78.94 g
Average Daily Feed intake: Day 07 - 21 67.67 g
Average Daily Feed intake: Day 21 - 35 123.32 g
Average Daily Gain: Day 00 - 07 18.59 g
Average Daily Gain: Day 00 - 35 52.67 g
Average Daily Gain: Day 07 - 21 47.72 g
Average Daily Gain: Day 21 - 35 74.67 g
Average European Performance Efficiency Factor: Day 00 - 07 191.38 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.418 None
Average Feed to Conversion Ratio: Day 07 - 21 1.418 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.64 g
Average body weight at day 07 168.75 g
Average body weight at day 21 836.76 g
Average body weight at day 35 1882.1 g
European Performance Efficiency Factor: Day 00 - 35 351.45 None
European Performance Efficiency Factor: Day 07 - 21 336.45 None
European Performance Efficiency Factor: Day 21 - 35 452.12 None
FCR (not corrected): Day 00 - 07 0.971 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.499 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.652 None
Feed to Conversion Ratio: Day 00 - 07 0.971 g/g
Feed to Conversion Ratio: Day 00 - 35 1.499 g/g
Feed to Conversion Ratio: Day 21 - 35 1.652 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=92.86 P1=7.14 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.52 pH
Litter at Day 21 7.99 pH
Litter at Day 35 7.46 pH
Mean Abdominal fat Yield 1.5 %
Mean Abdominal fat weight 32.73 g
Mean Breast Yield 19.6 %
Mean Breast weight 430.1 g
Mean CRP at Day 07 1.696 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1678.8 g
Mean Carcass Yield 76.67 %
Mean HPT at Day 07 0.98752 ng/ml
Mean HPT at Day 21 0.69995 ng/ml
Mean HPT at Day 35 0.79964 ng/ml
Mean LPS at Day 07 7.0481 ng/L
Mean LPS at Day 21 4.3639 ng/L
Mean LPS at Day 35 5.5199 ng/L
Mean Legs Yield 20.37 %
Mean Legs weight 445.5 g
Mean TBARS 0.0967 mg MDA/kg
Mean carcass body weight 2188.3 g
Mean feather cortisol at Day 07 8.17 pg/mg
Mean feather cortisol at Day 21 8.77 pg/mg
Mean feather cortisol at Day 35 8.675 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB05 None

Sample metadata

Marker Measurement Units
Animal code CB05.01 None
Breed Ross None
C-Reactive protein 2.39 pg/ml
Chicken body weight 152 g
Feather cortisol 11.39 pg/mg
Haptoglobin 41.72 ng/ml
Lipopolysaccharide 48.43 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None