HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904856: a HoloFood chicken host

Data available for SAMEA112904856


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 6 derived samples
API endpoint
/api/animals/SAMEA112904856 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904856, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.1 g
Average Daily Feed intake: Day 00 - 35 89.92 g
Average Daily Feed intake: Day 07 - 21 59.67 g
Average Daily Feed intake: Day 21 - 35 160.86 g
Average Daily Gain: Day 00 - 07 17.68 g
Average Daily Gain: Day 00 - 35 55.58 g
Average Daily Gain: Day 07 - 21 47.47 g
Average Daily Gain: Day 21 - 35 82.64 g
Average European Performance Efficiency Factor: Day 00 - 07 163.77 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.257 None
Average Feed to Conversion Ratio: Day 07 - 21 1.257 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.21 g
Average body weight at day 07 163 g
Average body weight at day 21 827.62 g
Average body weight at day 35 1984.5 g
European Performance Efficiency Factor: Day 00 - 35 343.57 None
European Performance Efficiency Factor: Day 07 - 21 377.66 None
European Performance Efficiency Factor: Day 21 - 35 424.52 None
FCR (not corrected): Day 00 - 07 1.08 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.618 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.947 None
Feed to Conversion Ratio: Day 00 - 07 1.08 g/g
Feed to Conversion Ratio: Day 00 - 35 1.618 g/g
Feed to Conversion Ratio: Day 21 - 35 1.947 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=78.13 P1=15.63 P2=6.25 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=65.38 P1=23.08 P2=11.54 P3=0.00 P4=0.00 %
Litter at Day 07 7.12 pH
Litter at Day 21 7.14 pH
Litter at Day 35 8.15 pH
Mean Abdominal fat Yield 1.49 %
Mean Abdominal fat weight 35.72 g
Mean Breast Yield 19.63 %
Mean Breast weight 472.13 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.5011 pg/mg
Mean Carcass Weight 1818.7 g
Mean Carcass Yield 75.78 %
Mean HPT at Day 07 1.7519 ng/ml
Mean HPT at Day 21 0.6552 ng/ml
Mean HPT at Day 35 0.59161 ng/ml
Mean LPS at Day 07 3.6202 ng/L
Mean LPS at Day 21 3.9979 ng/L
Mean LPS at Day 35 2.9732 ng/L
Mean Legs Yield 19.41 %
Mean Legs weight 465.42 g
Mean TBARS 0.0467 mg MDA/kg
Mean carcass body weight 2399.2 g
Mean feather cortisol at Day 07 9.0933 pg/mg
Mean feather cortisol at Day 21 10.332 pg/mg
Mean feather cortisol at Day 35 14.858 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA14 None

Sample metadata

Marker Measurement Units
Animal code CA14.11 None
Breed Ross None
C-Reactive protein 0.54 pg/ml
Chicken body weight 794 g
Feather cortisol 9.57 pg/mg
Haptoglobin 45.85 ng/ml
Lipopolysaccharide 15.93 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 21 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None