HoloFood Data Portal

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SAMEA112904811: a HoloFood chicken host

Data available for SAMEA112904811


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112904811 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904811, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.1 g
Average Daily Feed intake: Day 00 - 35 71.11 g
Average Daily Feed intake: Day 07 - 21 63.07 g
Average Daily Feed intake: Day 21 - 35 107.18 g
Average Daily Gain: Day 00 - 07 21.88 g
Average Daily Gain: Day 00 - 35 48.23 g
Average Daily Gain: Day 07 - 21 44.61 g
Average Daily Gain: Day 21 - 35 65.02 g
Average European Performance Efficiency Factor: Day 00 - 07 226.97 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.428 None
Average Feed to Conversion Ratio: Day 07 - 21 1.414 g/g
Average Mortality without culleds: Day 07 - 21 2.7 %
Average body weight at day 00 43.99 g
Average body weight at day 07 197.16 g
Average body weight at day 21 821.67 g
Average body weight at day 35 1732 g
European Performance Efficiency Factor: Day 00 - 35 318.93 None
European Performance Efficiency Factor: Day 07 - 21 306.98 None
European Performance Efficiency Factor: Day 21 - 35 394.49 None
FCR (not corrected): Day 00 - 07 0.964 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.48 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.648 None
Feed to Conversion Ratio: Day 00 - 07 0.964 g/g
Feed to Conversion Ratio: Day 00 - 35 1.474 g/g
Feed to Conversion Ratio: Day 21 - 35 1.648 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=76.19 P1=9.52 P2=9.52 P3=4.76 P4=0.00 %
Litter at Day 07 6.02 pH
Litter at Day 21 7.63 pH
Litter at Day 35 8.43 pH
Mean Abdominal fat Yield 0.99 %
Mean Abdominal fat weight 18.12 g
Mean Breast Yield 15.65 %
Mean Breast weight 279.18 g
Mean CRP at Day 07 1.6379 pg/mg
Mean CRP at Day 21 3.2215 pg/mg
Mean CRP at Day 35 1.0972 pg/mg
Mean Carcass Weight 1326.1 g
Mean Carcass Yield 74.5 %
Mean HPT at Day 07 0.85124 ng/ml
Mean HPT at Day 21 0.59161 ng/ml
Mean HPT at Day 35 0.76788 ng/ml
Mean LPS at Day 07 6.4719 ng/L
Mean LPS at Day 21 4.3806 ng/L
Mean LPS at Day 35 6.3 ng/L
Mean Legs Yield 21.68 %
Mean Legs weight 386.82 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 1783.3 g
Mean feather cortisol at Day 07 12.48 pg/mg
Mean feather cortisol at Day 21 9.2383 pg/mg
Mean feather cortisol at Day 35 9.82 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 2.7 %
Mortality: Day 21 - 35 0 %
Pen code CC18 None

Sample metadata

Marker Measurement Units
Animal code CC18.03 None
Breed Ross None
C-Reactive protein 4.12 pg/ml
Chicken body weight 173.9 g
Feather cortisol 8.06 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 41.2 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None