HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904802: a HoloFood chicken host

Data available for SAMEA112904802


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has host genomic data Has host genomic data
View 4 derived samples
API endpoint
/api/animals/SAMEA112904802 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904802, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 23.1 g
Average Daily Feed intake: Day 00 - 35 77.68 g
Average Daily Feed intake: Day 07 - 21 65.19 g
Average Daily Feed intake: Day 21 - 35 121.03 g
Average Daily Gain: Day 00 - 07 23.11 g
Average Daily Gain: Day 00 - 35 53.54 g
Average Daily Gain: Day 07 - 21 49.22 g
Average Daily Gain: Day 21 - 35 73.08 g
Average European Performance Efficiency Factor: Day 00 - 07 219.44 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.324 None
Average Feed to Conversion Ratio: Day 07 - 21 1.324 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 45.56 g
Average body weight at day 07 207.35 g
Average body weight at day 21 896.43 g
Average body weight at day 35 1919.6 g
European Performance Efficiency Factor: Day 00 - 35 350.11 None
European Performance Efficiency Factor: Day 07 - 21 371.61 None
European Performance Efficiency Factor: Day 21 - 35 441.29 None
FCR (not corrected): Day 00 - 07 1.03 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.456 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.656 None
Feed to Conversion Ratio: Day 00 - 07 0.999 g/g
Feed to Conversion Ratio: Day 00 - 35 1.451 g/g
Feed to Conversion Ratio: Day 21 - 35 1.656 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=52.38 P1=19.05 P2=28.57 P3=0.00 P4=0.00 %
Litter at Day 07 5.79 pH
Litter at Day 21 7.9 pH
Litter at Day 35 8.36 pH
Mean Abdominal fat Yield 1.17 %
Mean Abdominal fat weight 24.4 g
Mean Breast Yield 15.76 %
Mean Breast weight 315.95 g
Mean CRP at Day 07 1.6733 pg/mg
Mean CRP at Day 21 2.0273 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1492.2 g
Mean Carcass Yield 74.94 %
Mean HPT at Day 07 0.81246 ng/ml
Mean HPT at Day 21 0.76564 ng/ml
Mean HPT at Day 35 0.59161 ng/ml
Mean LPS at Day 07 6.5164 ng/L
Mean LPS at Day 21 2.9732 ng/L
Mean LPS at Day 35 6.8731 ng/L
Mean Legs Yield 21.8 %
Mean Legs weight 432.82 g
Mean TBARS 0.04 mg MDA/kg
Mean carcass body weight 1991.7 g
Mean feather cortisol at Day 07 17.257 pg/mg
Mean feather cortisol at Day 21 3.485 pg/mg
Mean feather cortisol at Day 35 20.952 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 5.13 %
Mortality: Day 00 - 35 5.13 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CC21 None

Sample metadata

Marker Measurement Units
Animal code CC21.03 None
Breed Ross None
C-Reactive protein 0.76 pg/ml
Chicken body weight 165.4 g
Feather cortisol 19.18 pg/mg
Haptoglobin 169.04 ng/ml
Lipopolysaccharide 40.7 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CC None
Trial description Trial 3 None
Trial end 2019-07-14 None
Trial start 2019-06-09 None